Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm24990-201ENSMUST00000157406 323 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm5070-201ENSMUST00000177599 862 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm2260-201ENSMUST00000184965 657 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.53□□□□□ -0.08
Rc3h1Q4VGL6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rc3h1Q4VGL6 Gm14208-201ENSMUST00000119645 678 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Gm13665-201ENSMUST00000120830 528 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Gm14760-201ENSMUST00000121831 999 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Gm14017-201ENSMUST00000121934 386 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Gm6963-201ENSMUST00000147879 379 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Gm16505-201ENSMUST00000179981 232 ntBASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rc3h1Q4VGL6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm14130-201ENSMUST00000118417 987 ntBASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm26361-201ENSMUST00000158868 186 ntBASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm27341-201ENSMUST00000183570 106 ntBASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rc3h1Q4VGL6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms