Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cul4aQ3TCH7 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Rmrp-201ENSMUST00000157463 271 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Gm22331-201ENSMUST00000158066 136 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Gm29705-201ENSMUST00000212598 474 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Gm17794-201ENSMUST00000220252 955 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cul4aQ3TCH7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Gm27892-201ENSMUST00000185017 106 ntBASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cul4aQ3TCH7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms