Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ebf1Q07802 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ebf1Q07802 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.75□□□□□ -0.37
Ebf1Q07802 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gm43947-201ENSMUST00000203019 959 ntBASIC12.75□□□□□ -0.37
Ebf1Q07802 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.75□□□□□ -0.37
Ebf1Q07802 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ebf1Q07802 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ebf1Q07802 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Mir7221-201ENSMUST00000184009 72 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gm43378-201ENSMUST00000199336 582 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.74□□□□□ -0.37
Ebf1Q07802 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Gm22058-201ENSMUST00000083393 310 ntBASIC12.74□□□□□ -0.37
Ebf1Q07802 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ebf1Q07802 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ebf1Q07802 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms