Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm26927-201ENSMUST00000182385 965 ntBASIC12.64□□□□□ -0.39
Pfdn6Q03958 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.64□□□□□ -0.39
Pfdn6Q03958 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn6Q03958 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Gm24526-201ENSMUST00000082921 158 ntBASIC12.63□□□□□ -0.39
Pfdn6Q03958 Gm10268-201ENSMUST00000085340 555 ntBASIC12.63□□□□□ -0.39
Pfdn6Q03958 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.63□□□□□ -0.39
Pfdn6Q03958 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn6Q03958 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.62□□□□□ -0.39
Pfdn6Q03958 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn6Q03958 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms