Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col1a2Q01149 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Rprl1-201ENSMUST00000158050 327 ntBASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm28071-201ENSMUST00000190355 478 ntBASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col1a2Q01149 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm7722-201ENSMUST00000120646 741 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.61■□□□□ 0.09
Col1a2Q01149 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col1a2Q01149 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col1a2Q01149 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm11331-201ENSMUST00000119764 288 ntBASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm12164-201ENSMUST00000121695 551 ntBASIC15.6■□□□□ 0.09
Col1a2Q01149 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm37986-201ENSMUST00000193285 383 ntBASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm18711-201ENSMUST00000199341 750 ntBASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm270-201ENSMUST00000223010 976 ntBASIC15.6■□□□□ 0.09
Col1a2Q01149 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col1a2Q01149 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.6■□□□□ 0.09
Col1a2Q01149 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms