Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scn1bP97952 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.49□□□□□ -0.57
Scn1bP97952 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Scn1bP97952 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.48□□□□□ -0.57
Scn1bP97952 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.48□□□□□ -0.57
Scn1bP97952 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Scn1bP97952 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm43703-201ENSMUST00000200523 763 ntBASIC11.48□□□□□ -0.57
Scn1bP97952 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm5425-201ENSMUST00000214125 459 ntBASIC11.48□□□□□ -0.57
Scn1bP97952 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.48□□□□□ -0.57
Scn1bP97952 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.48□□□□□ -0.57
Scn1bP97952 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.48□□□□□ -0.57
Scn1bP97952 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scn1bP97952 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scn1bP97952 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scn1bP97952 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Scn1bP97952 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Scn1bP97952 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scn1bP97952 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Scn1bP97952 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn1bP97952 Gm42599-201ENSMUST00000201308 469 ntBASIC11.47□□□□□ -0.57
Scn1bP97952 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.47□□□□□ -0.57
Scn1bP97952 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.47□□□□□ -0.57
Scn1bP97952 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.47□□□□□ -0.57
Scn1bP97952 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scn1bP97952 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.46□□□□□ -0.57
Scn1bP97952 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Scn1bP97952 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms