Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcaP82350 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Gm15693-201ENSMUST00000120470 637 ntBASIC10.55□□□□□ -0.72
SgcaP82350 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.55□□□□□ -0.72
SgcaP82350 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcaP82350 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.55□□□□□ -0.72
SgcaP82350 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Gm5312-201ENSMUST00000203728 547 ntBASIC10.55□□□□□ -0.72
SgcaP82350 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.55□□□□□ -0.72
SgcaP82350 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SgcaP82350 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.55□□□□□ -0.72
SgcaP82350 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.55□□□□□ -0.72
SgcaP82350 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.55□□□□□ -0.72
SgcaP82350 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcaP82350 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.55□□□□□ -0.72
SgcaP82350 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.55□□□□□ -0.72
SgcaP82350 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SgcaP82350 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcaP82350 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcaP82350 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcaP82350 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcaP82350 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Gm27702-201ENSMUST00000184512 56 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcaP82350 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.54□□□□□ -0.72
SgcaP82350 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SgcaP82350 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.54□□□□□ -0.72
SgcaP82350 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcaP82350 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.54□□□□□ -0.72
SgcaP82350 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcaP82350 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms