Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.6□□□□□ -0.23
CiitaP79621 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CiitaP79621 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.6□□□□□ -0.23
CiitaP79621 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Gm14644-201ENSMUST00000116671 647 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CiitaP79621 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.6□□□□□ -0.23
CiitaP79621 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.6□□□□□ -0.23
CiitaP79621 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.6□□□□□ -0.23
CiitaP79621 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.6□□□□□ -0.23
CiitaP79621 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
CiitaP79621 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.59□□□□□ -0.23
CiitaP79621 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CiitaP79621 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.59□□□□□ -0.23
CiitaP79621 Gm6963-201ENSMUST00000147879 379 ntBASIC13.59□□□□□ -0.23
CiitaP79621 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.59□□□□□ -0.23
CiitaP79621 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Gm2383-201ENSMUST00000181461 807 ntBASIC13.59□□□□□ -0.23
CiitaP79621 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CiitaP79621 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CiitaP79621 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CiitaP79621 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CiitaP79621 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CiitaP79621 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CiitaP79621 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CiitaP79621 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.58□□□□□ -0.24
CiitaP79621 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CiitaP79621 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.58□□□□□ -0.24
CiitaP79621 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CiitaP79621 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.58□□□□□ -0.24
CiitaP79621 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.58□□□□□ -0.24
CiitaP79621 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.58□□□□□ -0.24
CiitaP79621 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.58□□□□□ -0.24
CiitaP79621 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms