Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stra8P70278 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stra8P70278 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Stra8P70278 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Stra8P70278 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC17.36■□□□□ 0.37
Stra8P70278 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Stra8P70278 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Stra8P70278 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Gm14350-201ENSMUST00000116642 640 ntBASIC17.35■□□□□ 0.37
Stra8P70278 Gm13612-201ENSMUST00000119276 390 ntBASIC17.35■□□□□ 0.37
Stra8P70278 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Gm27390-201ENSMUST00000184516 176 ntBASIC17.35■□□□□ 0.37
Stra8P70278 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.35■□□□□ 0.37
Stra8P70278 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.35■□□□□ 0.37
Stra8P70278 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.35■□□□□ 0.37
Stra8P70278 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Gm26035-201ENSMUST00000083065 308 ntBASIC17.35■□□□□ 0.37
Stra8P70278 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Stra8P70278 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Stra8P70278 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.34■□□□□ 0.37
Stra8P70278 Gm8617-201ENSMUST00000118796 2222 ntBASIC17.34■□□□□ 0.37
Stra8P70278 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.34■□□□□ 0.37
Stra8P70278 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.34■□□□□ 0.37
Stra8P70278 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.34■□□□□ 0.37
Stra8P70278 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.34■□□□□ 0.37
Stra8P70278 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Stra8P70278 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Stra8P70278 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Stra8P70278 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Stra8P70278 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stra8P70278 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stra8P70278 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.33■□□□□ 0.37
Stra8P70278 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Stra8P70278 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stra8P70278 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stra8P70278 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Stra8P70278 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.33■□□□□ 0.36
Stra8P70278 Gm27839-201ENSMUST00000184242 106 ntBASIC17.33■□□□□ 0.36
Stra8P70278 Gm5035-201ENSMUST00000215581 927 ntBASIC17.33■□□□□ 0.36
Stra8P70278 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC17.33■□□□□ 0.36
Stra8P70278 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC17.33■□□□□ 0.36
Stra8P70278 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Stra8P70278 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC17.32■□□□□ 0.36
Stra8P70278 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.32■□□□□ 0.36
Stra8P70278 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.32■□□□□ 0.36
Stra8P70278 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Gm8652-201ENSMUST00000181363 964 ntBASIC17.32■□□□□ 0.36
Stra8P70278 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.32■□□□□ 0.36
Stra8P70278 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.32■□□□□ 0.36
Stra8P70278 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.32■□□□□ 0.36
Stra8P70278 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.32■□□□□ 0.36
Stra8P70278 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms