Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.4□□□□□ -0.42
Traf6P70196 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.4□□□□□ -0.42
Traf6P70196 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.4□□□□□ -0.42
Traf6P70196 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.4□□□□□ -0.42
Traf6P70196 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.4□□□□□ -0.42
Traf6P70196 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.4□□□□□ -0.42
Traf6P70196 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Traf6P70196 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.4□□□□□ -0.42
Traf6P70196 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Traf6P70196 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.4□□□□□ -0.42
Traf6P70196 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Traf6P70196 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.4□□□□□ -0.42
Traf6P70196 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Traf6P70196 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Traf6P70196 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Traf6P70196 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Traf6P70196 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Traf6P70196 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Traf6P70196 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Gm15824-201ENSMUST00000119516 955 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.39□□□□□ -0.43
Traf6P70196 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.39□□□□□ -0.43
Traf6P70196 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.39□□□□□ -0.43
Traf6P70196 Gm22121-201ENSMUST00000175148 54 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Gm8602-201ENSMUST00000184045 607 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.39□□□□□ -0.43
Traf6P70196 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Traf6P70196 Gm10012-201ENSMUST00000078252 192 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Traf6P70196 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.39□□□□□ -0.43
Traf6P70196 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Traf6P70196 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Traf6P70196 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Traf6P70196 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Traf6P70196 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.38□□□□□ -0.43
Traf6P70196 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Traf6P70196 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Traf6P70196 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms