Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Six5P70178 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six5P70178 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Six5P70178 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six5P70178 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six5P70178 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Six5P70178 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Six5P70178 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Six5P70178 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Six5P70178 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Six5P70178 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.77□□□□□ -0.53
Six5P70178 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm5187-201ENSMUST00000117317 991 ntBASIC11.77□□□□□ -0.53
Six5P70178 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.77□□□□□ -0.53
Six5P70178 Rmrp-201ENSMUST00000157463 271 ntBASIC11.77□□□□□ -0.53
Six5P70178 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm19184-201ENSMUST00000196798 928 ntBASIC11.77□□□□□ -0.53
Six5P70178 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.77□□□□□ -0.53
Six5P70178 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.77□□□□□ -0.53
Six5P70178 Gm45925-201ENSMUST00000218882 744 ntBASIC11.77□□□□□ -0.53
Six5P70178 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.77□□□□□ -0.53
Six5P70178 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Six5P70178 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.77□□□□□ -0.53
Six5P70178 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.77□□□□□ -0.53
Six5P70178 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six5P70178 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Six5P70178 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.77□□□□□ -0.53
Six5P70178 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Cog3-203ENSMUST00000227473 4197 ntBASIC11.76□□□□□ -0.53
Six5P70178 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Six5P70178 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Gm24231-201ENSMUST00000104315 133 ntBASIC11.76□□□□□ -0.53
Six5P70178 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.76□□□□□ -0.53
Six5P70178 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.76□□□□□ -0.53
Six5P70178 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.76□□□□□ -0.53
Six5P70178 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.76□□□□□ -0.53
Six5P70178 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.76□□□□□ -0.53
Six5P70178 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.76□□□□□ -0.53
Six5P70178 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Six5P70178 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Six5P70178 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.76□□□□□ -0.53
Six5P70178 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six5P70178 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Six5P70178 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms