Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Tpm2P58774 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm29608-201ENSMUST00000190444 463 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm35960-201ENSMUST00000202712 767 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tpm2P58774 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.45□□□□□ -0.1
Tpm2P58774 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Tpm2P58774 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Tpm2P58774 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Tpm2P58774 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm2P58774 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.44□□□□□ -0.1
Tpm2P58774 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.44□□□□□ -0.1
Tpm2P58774 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Tpm2P58774 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.44□□□□□ -0.1
Tpm2P58774 Gm15376-201ENSMUST00000122258 783 ntBASIC14.44□□□□□ -0.1
Tpm2P58774 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.44□□□□□ -0.1
Tpm2P58774 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.44□□□□□ -0.1
Tpm2P58774 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tpm2P58774 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Gm29667-201ENSMUST00000190817 490 ntBASIC14.44□□□□□ -0.1
Tpm2P58774 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.44□□□□□ -0.1
Tpm2P58774 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Btrc-209ENSMUST00000224478 2194 ntBASIC14.44□□□□□ -0.1
Tpm2P58774 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.44□□□□□ -0.1
Tpm2P58774 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tpm2P58774 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 Gm5124-202ENSMUST00000132683 2083 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Tpm2P58774 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Tpm2P58774 Gm15487-201ENSMUST00000122373 465 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.43□□□□□ -0.1
Tpm2P58774 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tpm2P58774 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tpm2P58774 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms