Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.25□□□□□ -0.61
Abcd3P55096 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.25□□□□□ -0.61
Abcd3P55096 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Abcd3P55096 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.25□□□□□ -0.61
Abcd3P55096 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Abcd3P55096 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Abcd3P55096 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Gm12384-201ENSMUST00000119228 919 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.24□□□□□ -0.61
Abcd3P55096 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.24□□□□□ -0.61
Abcd3P55096 Mir1938-201ENSMUST00000158746 100 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Abcd3P55096 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Abcd3P55096 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.24□□□□□ -0.61
Abcd3P55096 Gm6266-201ENSMUST00000203844 806 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.24□□□□□ -0.61
Abcd3P55096 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.24□□□□□ -0.61
Abcd3P55096 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Abcd3P55096 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Abcd3P55096 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.23□□□□□ -0.61
Abcd3P55096 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.23□□□□□ -0.61
Abcd3P55096 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Abcd3P55096 Gm11591-201ENSMUST00000120063 702 ntBASIC11.23□□□□□ -0.61
Abcd3P55096 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.23□□□□□ -0.61
Abcd3P55096 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.23□□□□□ -0.61
Abcd3P55096 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Abcd3P55096 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Abcd3P55096 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.23□□□□□ -0.61
Abcd3P55096 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Abcd3P55096 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.23□□□□□ -0.61
Abcd3P55096 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Abcd3P55096 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms