Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox3P53784 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox3P53784 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.07□□□□□ -0.48
Sox3P53784 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox3P53784 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox3P53784 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Gm27438-201ENSMUST00000183480 110 ntBASIC12.07□□□□□ -0.48
Sox3P53784 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox3P53784 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.07□□□□□ -0.48
Sox3P53784 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.07□□□□□ -0.48
Sox3P53784 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sox3P53784 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Matn2-203ENSMUST00000226766 3252 ntBASIC12.07□□□□□ -0.48
Sox3P53784 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sox3P53784 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sox3P53784 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.06□□□□□ -0.48
Sox3P53784 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox3P53784 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.06□□□□□ -0.48
Sox3P53784 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox3P53784 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox3P53784 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox3P53784 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Gm27023-201ENSMUST00000182372 285 ntBASIC12.06□□□□□ -0.48
Sox3P53784 Gm31256-201ENSMUST00000194705 506 ntBASIC12.06□□□□□ -0.48
Sox3P53784 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sox3P53784 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.06□□□□□ -0.48
Sox3P53784 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.06□□□□□ -0.48
Sox3P53784 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.06□□□□□ -0.48
Sox3P53784 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sox3P53784 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox3P53784 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox3P53784 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sox3P53784 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox3P53784 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms