Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lhx3P50481 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.71□□□□□ -0.37
Lhx3P50481 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lhx3P50481 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Lhx3P50481 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.71□□□□□ -0.38
Lhx3P50481 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lhx3P50481 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lhx3P50481 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.7□□□□□ -0.38
Lhx3P50481 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Lhx3P50481 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.7□□□□□ -0.38
Lhx3P50481 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lhx3P50481 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.7□□□□□ -0.38
Lhx3P50481 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lhx3P50481 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.7□□□□□ -0.38
Lhx3P50481 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.7□□□□□ -0.38
Lhx3P50481 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.7□□□□□ -0.38
Lhx3P50481 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Lhx3P50481 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.7□□□□□ -0.38
Lhx3P50481 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lhx3P50481 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lhx3P50481 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Lhx3P50481 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lhx3P50481 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lhx3P50481 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lhx3P50481 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Lhx3P50481 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lhx3P50481 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Lhx3P50481 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm14109-201ENSMUST00000118814 309 ntBASIC12.69□□□□□ -0.38
Lhx3P50481 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm27046-201ENSMUST00000182160 463 ntBASIC12.69□□□□□ -0.38
Lhx3P50481 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.69□□□□□ -0.38
Lhx3P50481 Gm6082-201ENSMUST00000215204 454 ntBASIC12.69□□□□□ -0.38
Lhx3P50481 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx3P50481 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Lhx3P50481 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lhx3P50481 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Lhx3P50481 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lhx3P50481 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms