Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm15376-201ENSMUST00000122258 783 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm11978-201ENSMUST00000122315 466 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.41□□□□□ -0.74
Nkx2-1P50220 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx2-1P50220 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Map1b-203ENSMUST00000223725 2669 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm28760-201ENSMUST00000185995 736 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm5279-201ENSMUST00000199575 745 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm20949-201ENSMUST00000206478 952 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.4□□□□□ -0.74
Nkx2-1P50220 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx2-1P50220 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.4□□□□□ -0.75
Nkx2-1P50220 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Nkx2-1P50220 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.4□□□□□ -0.75
Nkx2-1P50220 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-1P50220 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Nkx2-1P50220 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-1P50220 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms