Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.12□□□□□ -0.47
Tnfsf4P43488 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tnfsf4P43488 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm8515-201ENSMUST00000194852 576 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm6180-201ENSMUST00000065243 498 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.11□□□□□ -0.47
Tnfsf4P43488 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfsf4P43488 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm23984-201ENSMUST00000157139 203 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm45384-201ENSMUST00000210451 277 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm10146-201ENSMUST00000072739 309 ntBASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfsf4P43488 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms