Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.51□□□□□ -0.57
Nkx2-2P42586 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.51□□□□□ -0.57
Nkx2-2P42586 Gm5186-201ENSMUST00000218781 920 ntBASIC11.51□□□□□ -0.57
Nkx2-2P42586 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.51□□□□□ -0.57
Nkx2-2P42586 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nkx2-2P42586 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm10434-201ENSMUST00000101158 471 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm12742-201ENSMUST00000117326 410 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm43118-201ENSMUST00000199149 775 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm18054-201ENSMUST00000207539 555 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm45880-201ENSMUST00000213041 853 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.5□□□□□ -0.57
Nkx2-2P42586 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nkx2-2P42586 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm11793-201ENSMUST00000120433 981 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Mospd4-201ENSMUST00000180618 576 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm39404-201ENSMUST00000216350 313 ntBASIC11.49□□□□□ -0.57
Nkx2-2P42586 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-2P42586 Gm10076-201ENSMUST00000073238 384 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms