Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Gm8227-201ENSMUST00000223306 571 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Timp3P39876 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Timp3P39876 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.34□□□□□ -0.75
Timp3P39876 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.34□□□□□ -0.75
Timp3P39876 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Timp3P39876 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.33□□□□□ -0.76
Timp3P39876 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.33□□□□□ -0.76
Timp3P39876 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.33□□□□□ -0.76
Timp3P39876 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Timp3P39876 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Timp3P39876 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.33□□□□□ -0.76
Timp3P39876 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.33□□□□□ -0.76
Timp3P39876 Gm11222-201ENSMUST00000119005 738 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.33□□□□□ -0.76
Timp3P39876 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.33□□□□□ -0.76
Timp3P39876 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Gm8099-201ENSMUST00000200510 742 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Gm21769-201ENSMUST00000211922 111 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Cts7-204ENSMUST00000225321 1257 ntBASIC10.33□□□□□ -0.76
Timp3P39876 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Timp3P39876 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.33□□□□□ -0.76
Timp3P39876 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Timp3P39876 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Timp3P39876 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Timp3P39876 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Timp3P39876 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.32□□□□□ -0.76
Timp3P39876 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.32□□□□□ -0.76
Timp3P39876 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.32□□□□□ -0.76
Timp3P39876 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Timp3P39876 Gm15370-201ENSMUST00000117158 253 ntBASIC10.32□□□□□ -0.76
Timp3P39876 Gm14381-201ENSMUST00000122105 414 ntBASIC10.32□□□□□ -0.76
Timp3P39876 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Timp3P39876 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms