Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.92□□□□□ -0.82
Rom1P32958 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.92□□□□□ -0.82
Rom1P32958 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Rom1P32958 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.92□□□□□ -0.82
Rom1P32958 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.92□□□□□ -0.82
Rom1P32958 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Rom1P32958 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.92□□□□□ -0.82
Rom1P32958 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.92□□□□□ -0.82
Rom1P32958 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rom1P32958 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rom1P32958 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rom1P32958 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.91□□□□□ -0.82
Rom1P32958 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Rom1P32958 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rom1P32958 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rom1P32958 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.91□□□□□ -0.82
Rom1P32958 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.91□□□□□ -0.82
Rom1P32958 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rom1P32958 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.91□□□□□ -0.82
Rom1P32958 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rom1P32958 Gm7775-201ENSMUST00000218871 853 ntBASIC9.91□□□□□ -0.82
Rom1P32958 Itm2b-204ENSMUST00000228637 783 ntBASIC9.91□□□□□ -0.82
Rom1P32958 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rom1P32958 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Rom1P32958 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.91□□□□□ -0.82
Rom1P32958 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rom1P32958 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Rom1P32958 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.9□□□□□ -0.82
Rom1P32958 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rom1P32958 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rom1P32958 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rom1P32958 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.9□□□□□ -0.82
Rom1P32958 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Rom1P32958 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Rom1P32958 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.9□□□□□ -0.82
Rom1P32958 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.9□□□□□ -0.82
Rom1P32958 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.9□□□□□ -0.82
Rom1P32958 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rom1P32958 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.9□□□□□ -0.82
Rom1P32958 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.9□□□□□ -0.82
Rom1P32958 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms