Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a1P31648 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.83□□□□□ -0.68
Slc6a1P31648 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a1P31648 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm11424-201ENSMUST00000121929 829 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm5745-201ENSMUST00000183748 313 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.82□□□□□ -0.68
Slc6a1P31648 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm17330-201ENSMUST00000221047 165 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm26035-201ENSMUST00000083065 308 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.82□□□□□ -0.68
Slc6a1P31648 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc6a1P31648 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a1P31648 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.81□□□□□ -0.68
Slc6a1P31648 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.81□□□□□ -0.68
Slc6a1P31648 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm5354-201ENSMUST00000182417 973 ntBASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm9794-201ENSMUST00000202370 423 ntBASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.81□□□□□ -0.68
Slc6a1P31648 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.81□□□□□ -0.68
Slc6a1P31648 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc6a1P31648 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms