Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vcam1P29533 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.38□□□□□ -0.11
Vcam1P29533 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vcam1P29533 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vcam1P29533 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.37□□□□□ -0.11
Vcam1P29533 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vcam1P29533 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm22334-201ENSMUST00000158070 133 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm17827-201ENSMUST00000211825 742 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vcam1P29533 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.37□□□□□ -0.11
Vcam1P29533 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.37□□□□□ -0.11
Vcam1P29533 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vcam1P29533 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.37□□□□□ -0.11
Vcam1P29533 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vcam1P29533 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vcam1P29533 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vcam1P29533 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Vcam1P29533 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.36□□□□□ -0.11
Vcam1P29533 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm270-201ENSMUST00000223010 976 ntBASIC14.36□□□□□ -0.11
Vcam1P29533 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Vcam1P29533 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vcam1P29533 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.36□□□□□ -0.11
Vcam1P29533 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.36□□□□□ -0.11
Vcam1P29533 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vcam1P29533 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vcam1P29533 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms