Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Cog3-203ENSMUST00000227473 4197 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.63□□□□□ -0.55
Cd40lgP27548 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cd40lgP27548 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cd40lgP27548 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm37042-201ENSMUST00000193816 581 ntBASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm42627-201ENSMUST00000197347 224 ntBASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm45880-201ENSMUST00000213041 853 ntBASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.62□□□□□ -0.55
Cd40lgP27548 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.62□□□□□ -0.55
Cd40lgP27548 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.62□□□□□ -0.55
Cd40lgP27548 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cd40lgP27548 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.61□□□□□ -0.55
Cd40lgP27548 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cd40lgP27548 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cd40lgP27548 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cd40lgP27548 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms