Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mir877-201ENSMUST00000104738 85 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Col8a2P25318 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm20482-202ENSMUST00000174729 825 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Gm37201-201ENSMUST00000191845 523 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.47□□□□□ -0.73
Col8a2P25318 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Col8a2P25318 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.47□□□□□ -0.73
Col8a2P25318 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.47□□□□□ -0.73
Col8a2P25318 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Col8a2P25318 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Col8a2P25318 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.46□□□□□ -0.73
Col8a2P25318 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Col8a2P25318 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Col8a2P25318 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.46□□□□□ -0.73
Col8a2P25318 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.46□□□□□ -0.73
Col8a2P25318 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.46□□□□□ -0.73
Col8a2P25318 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.46□□□□□ -0.73
Col8a2P25318 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.46□□□□□ -0.73
Col8a2P25318 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Col8a2P25318 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Col8a2P25318 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Col8a2P25318 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Col8a2P25318 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Col8a2P25318 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.74
Col8a2P25318 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Col8a2P25318 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.46□□□□□ -0.74
Col8a2P25318 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms