Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.47□□□□□ -0.57
Hmgn1P18608 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.47□□□□□ -0.57
Hmgn1P18608 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hmgn1P18608 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hmgn1P18608 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.46□□□□□ -0.57
Hmgn1P18608 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Gm24231-201ENSMUST00000104315 133 ntBASIC11.46□□□□□ -0.57
Hmgn1P18608 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.46□□□□□ -0.57
Hmgn1P18608 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.46□□□□□ -0.57
Hmgn1P18608 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hmgn1P18608 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn1P18608 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hmgn1P18608 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hmgn1P18608 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn1P18608 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.46□□□□□ -0.58
Hmgn1P18608 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmgn1P18608 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hmgn1P18608 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hmgn1P18608 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hmgn1P18608 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.45□□□□□ -0.58
Hmgn1P18608 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Gm16296-201ENSMUST00000159905 325 ntBASIC11.45□□□□□ -0.58
Hmgn1P18608 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn1P18608 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.45□□□□□ -0.58
Hmgn1P18608 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms