Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga1P17095 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.8□□□□□ -0.36
Hmga1P17095 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Hmga1P17095 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga1P17095 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmga1P17095 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga1P17095 Mir6927-201ENSMUST00000184494 71 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga1P17095 Gm28450-201ENSMUST00000187349 638 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmga1P17095 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.79□□□□□ -0.36
Hmga1P17095 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga1P17095 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmga1P17095 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga1P17095 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.78□□□□□ -0.36
Hmga1P17095 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.78□□□□□ -0.36
Hmga1P17095 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hmga1P17095 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.78□□□□□ -0.36
Hmga1P17095 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmga1P17095 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.78□□□□□ -0.36
Hmga1P17095 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmga1P17095 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.77□□□□□ -0.36
Hmga1P17095 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hmga1P17095 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmga1P17095 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Hmga1P17095 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmga1P17095 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Hmga1P17095 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmga1P17095 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmga1P17095 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.77□□□□□ -0.37
Hmga1P17095 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hmga1P17095 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmga1P17095 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms