Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.98□□□□□ -0.33
PrnpP04925 Gm12501-201ENSMUST00000119163 529 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Gm15432-201ENSMUST00000121106 195 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Gm23119-201ENSMUST00000158610 140 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Gm19353-201ENSMUST00000184561 445 ntBASIC12.98□□□□□ -0.33
PrnpP04925 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.98□□□□□ -0.33
PrnpP04925 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.98□□□□□ -0.33
PrnpP04925 Gm45770-201ENSMUST00000212105 616 ntBASIC12.98□□□□□ -0.33
PrnpP04925 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.98□□□□□ -0.33
PrnpP04925 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.98□□□□□ -0.33
PrnpP04925 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Gm21811-201ENSMUST00000096485 930 ntBASIC12.98□□□□□ -0.33
PrnpP04925 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.98□□□□□ -0.33
PrnpP04925 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.98□□□□□ -0.33
PrnpP04925 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrnpP04925 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
PrnpP04925 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.97□□□□□ -0.33
PrnpP04925 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.97□□□□□ -0.33
PrnpP04925 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PrnpP04925 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Gm13045-201ENSMUST00000119019 712 ntBASIC12.97□□□□□ -0.33
PrnpP04925 Gm11941-201ENSMUST00000119904 610 ntBASIC12.97□□□□□ -0.33
PrnpP04925 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.97□□□□□ -0.33
PrnpP04925 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.97□□□□□ -0.33
PrnpP04925 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.97□□□□□ -0.33
PrnpP04925 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PrnpP04925 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrnpP04925 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Gm12165-201ENSMUST00000117047 342 ntBASIC12.96□□□□□ -0.33
PrnpP04925 Gm15131-201ENSMUST00000119124 595 ntBASIC12.96□□□□□ -0.33
PrnpP04925 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
PrnpP04925 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.96□□□□□ -0.33
PrnpP04925 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.96□□□□□ -0.33
PrnpP04925 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms