Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.18□□□□□ -0.94
TcraP01849 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
TcraP01849 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.18□□□□□ -0.94
TcraP01849 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.18□□□□□ -0.94
TcraP01849 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.18□□□□□ -0.94
TcraP01849 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.18□□□□□ -0.94
TcraP01849 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.18□□□□□ -0.94
TcraP01849 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
TcraP01849 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.18□□□□□ -0.94
TcraP01849 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
TcraP01849 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
TcraP01849 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TcraP01849 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
TcraP01849 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.17□□□□□ -0.94
TcraP01849 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
TcraP01849 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
TcraP01849 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.17□□□□□ -0.94
TcraP01849 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.17□□□□□ -0.94
TcraP01849 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gm12585-201ENSMUST00000117307 290 ntBASIC9.17□□□□□ -0.94
TcraP01849 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.17□□□□□ -0.94
TcraP01849 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.17□□□□□ -0.94
TcraP01849 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.17□□□□□ -0.94
TcraP01849 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.17□□□□□ -0.94
TcraP01849 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.17□□□□□ -0.94
TcraP01849 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.17□□□□□ -0.94
TcraP01849 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Gm6888-201ENSMUST00000221983 706 ntBASIC9.17□□□□□ -0.94
TcraP01849 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms