Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Gm23931-201ENSMUST00000103842 109 ntBASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Gm8227-201ENSMUST00000223306 571 ntBASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.84□□□□□ -0.67
Igh-VJ558P01758 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm13342-201ENSMUST00000121055 207 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igh-VJ558P01758 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms