Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chrna4O70174 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.67□□□□□ -0.38
Chrna4O70174 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chrna4O70174 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chrna4O70174 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.66□□□□□ -0.38
Chrna4O70174 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chrna4O70174 Gm9022-201ENSMUST00000182482 992 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Gm38002-201ENSMUST00000193255 180 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Gm38158-201ENSMUST00000194617 339 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 AY702102-202ENSMUST00000194651 1173 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.66□□□□□ -0.38
Chrna4O70174 Gm44405-201ENSMUST00000198952 126 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Gm45880-201ENSMUST00000213041 853 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Gm9823-201ENSMUST00000051212 327 ntBASIC12.66□□□□□ -0.38
Chrna4O70174 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chrna4O70174 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chrna4O70174 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chrna4O70174 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chrna4O70174 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chrna4O70174 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.65□□□□□ -0.38
Chrna4O70174 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm6023-201ENSMUST00000118217 606 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Gm13736-201ENSMUST00000119272 253 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm43133-201ENSMUST00000197472 463 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.65□□□□□ -0.38
Chrna4O70174 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm19309-201ENSMUST00000218295 205 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 Gm45925-201ENSMUST00000218882 744 ntBASIC12.65□□□□□ -0.38
Chrna4O70174 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chrna4O70174 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chrna4O70174 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms