Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Gm13392-201ENSMUST00000117708 150 ntBASIC12.48□□□□□ -0.41
Ldb2O55203 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ldb2O55203 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Gm27243-201ENSMUST00000183964 521 ntBASIC12.48□□□□□ -0.41
Ldb2O55203 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.48□□□□□ -0.41
Ldb2O55203 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ldb2O55203 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.48□□□□□ -0.41
Ldb2O55203 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.48□□□□□ -0.41
Ldb2O55203 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ldb2O55203 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.47□□□□□ -0.41
Ldb2O55203 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm6023-201ENSMUST00000118217 606 ntBASIC12.47□□□□□ -0.41
Ldb2O55203 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm27572-201ENSMUST00000183702 255 ntBASIC12.47□□□□□ -0.41
Ldb2O55203 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ldb2O55203 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb2O55203 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb2O55203 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm24136-201ENSMUST00000083374 165 ntBASIC12.47□□□□□ -0.41
Ldb2O55203 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb2O55203 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.47□□□□□ -0.41
Ldb2O55203 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ldb2O55203 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb2O55203 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb2O55203 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb2O55203 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb2O55203 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Mir1247-201ENSMUST00000116706 82 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 Gm12314-201ENSMUST00000118104 538 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 Gm13342-201ENSMUST00000121055 207 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms