Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm28882-201ENSMUST00000185504 314 ntBASIC14.44□□□□□ -0.1
Copb2O55029 Gzmn-202ENSMUST00000225535 989 ntBASIC14.44□□□□□ -0.1
Copb2O55029 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Copb2O55029 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Copb2O55029 Gm10312-201ENSMUST00000078515 489 ntBASIC14.44□□□□□ -0.1
Copb2O55029 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Copb2O55029 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Copb2O55029 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.44□□□□□ -0.1
Copb2O55029 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.44□□□□□ -0.1
Copb2O55029 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Copb2O55029 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.43□□□□□ -0.1
Copb2O55029 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Copb2O55029 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Copb2O55029 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Gm15703-201ENSMUST00000120250 880 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Gm13665-201ENSMUST00000120830 528 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Rmrp-201ENSMUST00000157463 271 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Gm26361-201ENSMUST00000158868 186 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Gm26461-201ENSMUST00000175064 290 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.43□□□□□ -0.1
Copb2O55029 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.43□□□□□ -0.1
Copb2O55029 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.43□□□□□ -0.1
Copb2O55029 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.43□□□□□ -0.1
Copb2O55029 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Copb2O55029 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Gm14208-201ENSMUST00000119645 678 ntBASIC14.42□□□□□ -0.1
Copb2O55029 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.42□□□□□ -0.1
Copb2O55029 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.42□□□□□ -0.1
Copb2O55029 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.42□□□□□ -0.1
Copb2O55029 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.42□□□□□ -0.1
Copb2O55029 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
Copb2O55029 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Copb2O55029 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.41□□□□□ -0.1
Copb2O55029 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Copb2O55029 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Copb2O55029 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms