Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Itgb3O54890 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.31□□□□□ -0.28
Itgb3O54890 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Itgb3O54890 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.3□□□□□ -0.28
Itgb3O54890 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Itgb3O54890 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.3□□□□□ -0.28
Itgb3O54890 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Itgb3O54890 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Itgb3O54890 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Gm24845-201ENSMUST00000158034 109 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Gm27046-201ENSMUST00000182160 463 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 Gm9022-201ENSMUST00000182482 992 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Gm26035-201ENSMUST00000083065 308 ntBASIC13.3□□□□□ -0.28
Itgb3O54890 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.3□□□□□ -0.28
Itgb3O54890 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Itgb3O54890 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Itgb3O54890 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Mir877-201ENSMUST00000104738 85 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 Gm14832-201ENSMUST00000121289 322 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm28882-201ENSMUST00000185504 314 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 Gm3096-201ENSMUST00000185770 364 ntBASIC13.29□□□□□ -0.28
Itgb3O54890 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.29□□□□□ -0.28
Itgb3O54890 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Itgb3O54890 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Itgb3O54890 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Itgb3O54890 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Itgb3O54890 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Itgb3O54890 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Itgb3O54890 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Itgb3O54890 Gm15808-201ENSMUST00000119046 604 ntBASIC13.28□□□□□ -0.28
Itgb3O54890 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.28□□□□□ -0.28
Itgb3O54890 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.28□□□□□ -0.28
Itgb3O54890 Gm18304-201ENSMUST00000189162 546 ntBASIC13.28□□□□□ -0.28
Itgb3O54890 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms