Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ChkaO54804 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.7□□□□□ -0.38
ChkaO54804 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ChkaO54804 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.69□□□□□ -0.38
ChkaO54804 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Gm27486-201ENSMUST00000184923 80 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Gm6091-201ENSMUST00000098307 165 ntBASIC12.69□□□□□ -0.38
ChkaO54804 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ChkaO54804 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
ChkaO54804 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ChkaO54804 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Gm24231-201ENSMUST00000104315 133 ntBASIC12.68□□□□□ -0.38
ChkaO54804 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ChkaO54804 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ChkaO54804 Gm27847-201ENSMUST00000183711 107 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Gm27375-201ENSMUST00000183799 107 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.68□□□□□ -0.38
ChkaO54804 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
ChkaO54804 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ChkaO54804 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.68□□□□□ -0.38
ChkaO54804 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
ChkaO54804 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ChkaO54804 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ChkaO54804 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms