Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm15004-201ENSMUST00000119192 630 ntBASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm12029-201ENSMUST00000120073 832 ntBASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm18893-201ENSMUST00000198416 943 ntBASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm7002-201ENSMUST00000221386 2165 ntBASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Gm6905-201ENSMUST00000205729 511 ntBASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 AC166344.1-201ENSMUST00000223745 674 ntBASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcf11G3X9Z4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm23912-201ENSMUST00000104687 87 ntBASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm5706-201ENSMUST00000181525 993 ntBASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm9463-201ENSMUST00000206707 601 ntBASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcf11G3X9Z4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcf11G3X9Z4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms