Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12899-201ENSMUST00000120565 551 ntBASIC10.6□□□□□ -0.71
Col6a4A2AX52 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm23363-201ENSMUST00000175024 79 ntBASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm10179-201ENSMUST00000086233 688 ntBASIC10.6□□□□□ -0.71
Col6a4A2AX52 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm27627-201ENSMUST00000183644 150 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Mir6546-201ENSMUST00000184460 62 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm12029-201ENSMUST00000120073 832 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm45550-201ENSMUST00000209380 946 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a4A2AX52 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Col6a4A2AX52 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm15711-201ENSMUST00000118889 535 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Gm13888-201ENSMUST00000119148 422 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a4A2AX52 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.58□□□□□ -0.72
Col6a4A2AX52 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a4A2AX52 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms