Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn3aA2ASI5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm12164-201ENSMUST00000121695 551 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm12857-201ENSMUST00000117678 592 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm14247-201ENSMUST00000120950 237 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Rprl1-201ENSMUST00000158050 327 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm3332-201ENSMUST00000189337 928 ntBASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn3aA2ASI5 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gm28071-201ENSMUST00000190355 478 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gm29787-201ENSMUST00000222129 849 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn3aA2ASI5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Scn3aA2ASI5 Gm11509-201ENSMUST00000117358 325 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms