Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Gm37917-201ENSMUST00000194711 392 ntBASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav12d-1A0N8R0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm24231-201ENSMUST00000104315 133 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm13123-201ENSMUST00000122173 492 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm16296-201ENSMUST00000159905 325 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Mir6392-201ENSMUST00000184924 108 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm2495-201ENSMUST00000191160 466 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm37042-201ENSMUST00000193816 581 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm18624-201ENSMUST00000220966 658 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Gm5867-201ENSMUST00000063197 592 ntBASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav12d-1A0N8R0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms