Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm14822-201ENSMUST00000122247 291 ntBASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm24447-201ENSMUST00000083977 338 ntBASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm13453-201ENSMUST00000118708 357 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm18165-201ENSMUST00000217426 928 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms