Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav5-4A0A075B652 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm8598-201ENSMUST00000221184 836 ntBASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav5-4A0A075B652 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm13813-201ENSMUST00000120998 787 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Proscos-202ENSMUST00000178990 666 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms