Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Gm16372-201ENSMUST00000073088 450 ntBASIC10.09□□□□□ -0.79
Gm12728V9GX31 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.09□□□□□ -0.79
Gm12728V9GX31 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Gm12728V9GX31 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm12728V9GX31 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Mir6392-201ENSMUST00000184924 108 ntBASIC10.08□□□□□ -0.8
Gm12728V9GX31 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm12728V9GX31 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Gm5687-201ENSMUST00000118252 640 ntBASIC10.07□□□□□ -0.8
Gm12728V9GX31 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm12728V9GX31 Gm6152-201ENSMUST00000151704 340 ntBASIC10.07□□□□□ -0.8
Gm12728V9GX31 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms