Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cldn6Q9Z262 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldn6Q9Z262 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gm24231-201ENSMUST00000104315 133 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldn6Q9Z262 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Daam2-202ENSMUST00000224595 1926 ntBASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm11425-201ENSMUST00000119608 498 ntBASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm3890-201ENSMUST00000182416 207 ntBASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm9396-201ENSMUST00000076703 567 ntBASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.76□□□□□ -0.53
Cldn6Q9Z262 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms