Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldn9Q9Z0S7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Rubie-203ENSMUST00000227803 2430 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.09□□□□□ -0.47
Cldn9Q9Z0S7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldn9Q9Z0S7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cldn9Q9Z0S7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms