Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne8Q9DC53 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm25261-201ENSMUST00000157416 134 ntBASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm17150-201ENSMUST00000165577 381 ntBASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm9630-201ENSMUST00000178304 885 ntBASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpne8Q9DC53 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpne8Q9DC53 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpne8Q9DC53 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gm12502-201ENSMUST00000120197 444 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gm7809-201ENSMUST00000153199 742 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpne8Q9DC53 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpne8Q9DC53 Gm8738-201ENSMUST00000172606 329 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms