Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lysmd1Q9D0E3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm13192-201ENSMUST00000101199 208 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm12684-201ENSMUST00000118675 999 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm10443-201ENSMUST00000119024 210 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm18776-201ENSMUST00000188833 654 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm20568-201ENSMUST00000197129 208 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lysmd1Q9D0E3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Gm24844-201ENSMUST00000158679 127 ntBASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lysmd1Q9D0E3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lysmd1Q9D0E3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms