Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shmt2Q9CZN7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm14127-201ENSMUST00000117906 678 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Shmt2Q9CZN7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Shmt2Q9CZN7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms