Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm19184-201ENSMUST00000196798 928 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm9797-201ENSMUST00000052902 613 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm20445-201ENSMUST00000061905 565 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gm26035-201ENSMUST00000083065 308 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hdhd3Q9CYW4 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm14350-201ENSMUST00000116642 640 ntBASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hdhd3Q9CYW4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hdhd3Q9CYW4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms