Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm13123-201ENSMUST00000122173 492 ntBASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm28631-201ENSMUST00000190740 334 ntBASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ssu72Q9CY97 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Gm37042-201ENSMUST00000193816 581 ntBASIC12.46□□□□□ -0.41
Ssu72Q9CY97 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ssu72Q9CY97 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.46□□□□□ -0.42
Ssu72Q9CY97 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ssu72Q9CY97 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ssu72Q9CY97 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms