Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4Q99P72 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rtn4Q99P72 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rtn4Q99P72 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Gm12384-201ENSMUST00000119228 919 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Gm15279-201ENSMUST00000155593 288 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 Gm45880-201ENSMUST00000213041 853 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 AC069561.1-201ENSMUST00000213750 424 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Gm37234-201ENSMUST00000193259 1441 ntBASIC16.62■□□□□ 0.25
Rtn4Q99P72 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rtn4Q99P72 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC16.61■□□□□ 0.25
Rtn4Q99P72 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.61■□□□□ 0.25
Rtn4Q99P72 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm44241-201ENSMUST00000203230 1662 ntBASIC16.61■□□□□ 0.25
Rtn4Q99P72 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm42968-201ENSMUST00000198578 1372 ntBASIC16.61■□□□□ 0.25
Rtn4Q99P72 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.61■□□□□ 0.25
Rtn4Q99P72 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtn4Q99P72 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm42879-201ENSMUST00000198656 2214 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm7211-201ENSMUST00000172692 1118 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm27005-201ENSMUST00000182783 921 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm38144-201ENSMUST00000192790 465 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Gm42452-201ENSMUST00000199749 617 ntBASIC16.6■□□□□ 0.25
Rtn4Q99P72 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtn4Q99P72 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms