Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rnf111Q99ML9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf111Q99ML9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf111Q99ML9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf111Q99ML9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms